19406213 Lab Seminar

SoSe 24: SARS-CoV-2 Bioinformatics & Data Science

Max von Kleist, Martin Hölzer

Comments

We will introduce bioinformatics approaches for the analysis, surveillance and phenotypic assessment of SARS-CoV-2 and its variants of concern (VOC). This will involve approaches for SARS-CoV-2 genome reconstruction from raw sequencing data (Illumina, ONT), lineage assignment, genomic profiling and phenotypic inference, clustering of sequences, phylogeny and genome-based incidence estimation.   The students will work hands-on with real data and conduct small projects, which will be presented on week 2. A typical day in week one will consist of lectures highlighting the biological-, public health and methodological background, hands-on work followed by short concluding summaries. Towards the end of the day, the students will work in-depth on their designated projects that will be presented in week 2. close

9 Class schedule

Regular appointments

Mon, 2024-09-23 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Tue, 2024-09-24 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Wed, 2024-09-25 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Thu, 2024-09-26 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Fri, 2024-09-27 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Mon, 2024-09-30 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Tue, 2024-10-01 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Wed, 2024-10-02 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Fri, 2024-10-04 09:00 - 17:00

Lecturers:
Univ.-Prof. Dr. Max von Kleist

Location:
A6/017 Frontalunterrichtsraum (Bioinf) (Arnimallee 6)

Subjects A - Z